BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011D10LP1|AL426212
(775 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1534 0.0
>3x_Contig1806
Length = 53694
Score = 1534 bits (773), Expect = 0.0
Identities = 774/775 (99%)
Strand = Plus / Plus
Query: 1 atcagatgactaattcttcaaatgtcgatggctccaatccatacatgggctccaaaaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39887 atcagatgactaattcttcaaatgtcgatggctccaatccatacatgggctccaaaaccg 39946
Query: 61 cacaacaattggggaactatattgctgtccattacggtgagctaattggtgattcattgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39947 cacaacaattggggaactatattgctgtccattacggtgagctaattggtgattcattgc 40006
Query: 121 ctattttctcttccagcgctgggagggtttatgaaacggctaaaaatgtaatcattggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40007 ctattttctcttccagcgctgggagggtttatgaaacggctaaaaatgtaatcattggtc 40066
Query: 181 tgcaggaagaacttggcttcaacgttgacgtccaattacaaataatatcggaagatcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40067 tgcaggaagaacttggcttcaacgttgacgtccaattacaaataatatcggaagatcagg 40126
Query: 241 cttctggagcaaattccttaactcctcgtaattcatgtaaaaattataattccgagtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40127 cttctggagcaaattccttaactcctcgtaattcatgtaaaaattataattccgagtttg 40186
Query: 301 ccaaacaagttttaggaagtgtcaatgactcgcagttaaagaagatcagggaaagactga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40187 ccaaacaagttttaggaagtgtcaatgactcgcagttaaagaagatcagggaaagactga 40246
Query: 361 tgaagaagaactctcagttgcccttgaaactaaaaaacaaagatataaaacaactaattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40247 tgaagaagaactctcagttgcccttgaaactaaaaaacaaagatataaaacaactaattt 40306
Query: 421 cgtggtgcgcatatgamataaatattaaaggctactctcccgtgtgcgatctttttggag 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40307 cgtggtgcgcatatgaaataaatattaaaggctactctcccgtgtgcgatctttttggag 40366
Query: 481 atgaggatttagtctcatactcttatttctccgacatggaaaacttttataacagtggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40367 atgaggatttagtctcatactcttatttctccgacatggaaaacttttataacagtggtc 40426
Query: 541 ttggaaatcctctagcaaagtcattgggatctgtattacttaacgcttcgtatcaacttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40427 ttggaaatcctctagcaaagtcattgggatctgtattacttaacgcttcgtatcaacttt 40486
Query: 601 taaaggagagtgaacacttggagaataaagtctggttgtcatttactcacgatactgata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40487 taaaggagagtgaacacttggagaataaagtctggttgtcatttactcacgatactgata 40546
Query: 661 ttcaacactttgtgtcagctattggattatttgatgatggagcagagcgtttccaaggcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40547 ttcaacactttgtgtcagctattggattatttgatgatggagcagagcgtttccaaggcg 40606
Query: 721 aacaagtctcgttccaaaatatctttaaaagaggtagttggatcactcctatggg 775
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40607 aacaagtctcgttccaaaatatctttaaaagaggtagttggatcactcctatggg 40661
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5754
Number of Sequences: 1807
Number of extensions: 5754
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 775
length of database: 10,358,551
effective HSP length: 16
effective length of query: 759
effective length of database: 10,329,639
effective search space: 7840196001
effective search space used: 7840196001
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)